Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820785.1_cds_XP_016500545.1_14364
CDS Infomation

[gene=LOC107818978] [db_xref=GeneID:107818978] [protein=protein SAND-like] [protein_id=XP_016500545.1] [location=join(133884..134369,135207..135286,135425..135496,135637..135676,137020..137121,137255..137376,138288..138420,138527..138618,139786..139867,140275..140339,140524..140826,140916..141007,141664..141728,142475..142570)] [gbkey=CDS]
Sequence

ATGCCTTCCGACTCTGACTTATCGGACGATGATCGGAAACCTAAGATTGGACCTAGCTCC
AACTCTATTGATCAGTCCTTGGACGCCATCGAGAATCAATTGTCCTCAATTTCAGTCAGT
CAACCCGAATCCGAACCCGAATTCGATGATGCCAAGGATACTTCGCCATCCAATCAGGAT
AAGCTCGTGAATGGATCGTTGAATGAGAATCCCGGAGCTGAAGAGCTGCCTCGTATCAAT
GTGGCGGAAGACTTTAGCTCTTCGAGTGCCATGTGGAGGAACAATTCGGAAGAAATGGAG
GCGCCGTCAAGTCCTAGTAGTAGTGGCTATGCGGGTGAAAGAGGGAGTAGTAACGCCAGT
AGTAGGACCTCTGGCATTGAGGAGGAGGTCGATGGTGAGATTCTCGAAATTGGGAATAGT
GATTCTTTTGACGGAGTTTCCGACTCTCAAGTGCAATGGCTTCCTGGGAAACGCCACGGC
AGTGAGGATGATGCTTCTATTTCATGGAGAAAAAGAAAGAAGCACTTCTTTGTCTTGAGT
AACTCAGGAAAACCGATATACTCAAGATATGGAGATGAACACAAGCTTGCTGGATTCTCT
GCCACTTTGCAGGCCATCATTTCATTTGTGGAGAATGGGGGTGATCGAGTCAACTTGGTC
AGAGCCGGGAAACACCAGGTTGTATTTCTTGTGAAAGGACCTATTTACTTGGTTTGCATA
AGCTGTACAGAAGAGTCATATCAGTCATTGAGGGTACAACTAGAGCTCCTCTATGGTCAG
ATGATACTTATTCTTACGAAGTCTGTGAATAGATGTTTCGAGAAGAACTCTAAATTTGAT
ATGACTCCTTTGCTTGGAGGAACGGACGTTGTCTTCTCTTCTCTAATCCATTCGTTCAGT
TGGAACCCAGCTAGTTTTCTCCATGCTTACACATGTCTTCCACTTGCTTATGCGACAAGG
CAAGCTGCTGGTGCCATCTTGCAAGATGTAGCTGACTCAGGGGTCTTGTTTGCCATATTA
ATGTGTAAACACAAGGTTATCAGTCTTGTTGGTGCACAGAAAGCATCACTTCACCCTGAT
GATATGCTATTGCTCTCCAACTTTGTTATGTCTTCTGAATCATTTAGGACATCAGAATCC
TTCTCACCAATATGCTTACCAAGATACAACCCCATGGCATTTCTACATGCTTATGTGCAG
TACCTCGATGTTGACACATATTTAATATTGCTTACTACAAGTTCAGATGCCTTTCATCAT
CTTAAAGATTGCAGGGTTCGTATTGAAGAGGTACTTCTGGAGTCCAATGTACTTGGTGAA
GCTCAAAGATCCATGGTTGATGGTGGCATGCGCGTTGAGGATTTACCTACCGATCATGGT
TCTCTTTCCGGAGCAGTCTCCCCTCATCTGGGTCAGCCTGGACATACTAGAGAGTCATCA
GACAGATTTTCTGAAGCATTCATAGGTGTTGGTGGTCCTGCTGGACTTTGGCATTTTATG
TATCGAAGTATTTATCTTGACCAGTATGTCTCATCCGAGTTTTCCTCACCAGTAAATAAT
AGACAACAGCAGAAAAGGTTGTATAGAGCTTACCAGAAGCTTTATGCATCCATGCATGAT
AAAGGAGTTGGACCTCACAAAACTCAGTTCAGAAGGGATGAAAATTATGTTCTGCTGTGC
TGGGTTACTCAGGATTTCGAGCTTTATGCAGCATTTGATCCCCTGGCAGACAAGGCTCTA
GCTATAAAAACTTGCAATCGAGTGTGTCAGTGGATCAAGAACATAGAAAATGAGATTTTC
TTGTTAGGAGCGAGTCCTTTCTCATGGTGA

Peptide Sequence

PEP ID

XP_016500545.1
PEP Infomation

PREDICTED: protein SAND-like [Nicotiana tabacum]
Sequence

MPSDSDLSDDDRKPKIGPSSNSIDQSLDAIENQLSSISVSQPESEPEFDDAKDTSPSNQD
KLVNGSLNENPGAEELPRINVAEDFSSSSAMWRNNSEEMEAPSSPSSSGYAGERGSSNAS
SRTSGIEEEVDGEILEIGNSDSFDGVSDSQVQWLPGKRHGSEDDASISWRKRKKHFFVLS
NSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVNLVRAGKHQVVFLVKGPIYLVCI
SCTEESYQSLRVQLELLYGQMILILTKSVNRCFEKNSKFDMTPLLGGTDVVFSSLIHSFS
WNPASFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCKHKVISLVGAQKASLHPD
DMLLLSNFVMSSESFRTSESFSPICLPRYNPMAFLHAYVQYLDVDTYLILLTTSSDAFHH
LKDCRVRIEEVLLESNVLGEAQRSMVDGGMRVEDLPTDHGSLSGAVSPHLGQPGHTRESS
DRFSEAFIGVGGPAGLWHFMYRSIYLDQYVSSEFSSPVNNRQQQKRLYRAYQKLYASMHD
KGVGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWIKNIENEIF
LLGASPFSW

Transcript Sequence

Gene sequence data has not been registered.